Parallel computing for bioinformatics and computational biology : models, enabling technologies, and case studies / edited by Albert Y. Zomaya.
Material type:
- text
- computer
- online resource
- 0471756490
- 9780471756491
- 1280462701
- 9781280462702
- 572.8/0285 22
- QH324.2 .P37 2006eb
- 2006 H-883
- QU 26.5
Includes bibliographical references and index.
Parallel and evolutionary approaches to computational biology / Nouhad Rizk -- Parallel Monte Carlo simulation of HIV molecular evolution in response to immune surveillance / Jack da Silva -- Differential evolutionary algorithms for in vivo dynamic analysis of glycolysis and pentose phosphate pathway in Escherichia coli / Andrei Doncescu -- Compute-intensive simulations for cellular models / Kevin Burrage -- Parallel computation in simulating diffusion and deformation in human brain / Jun Zhang -- Computational molecular biology / Azzedine Boukerche -- Special-purpose computing for biological sequence analysis / Bertil Schmidt -- Multiple sequence alignment in parallel on a cluster of workstations / Amitava Datta -- Searching sequence databases using high performance BLASTs / Xue Wu -- Parallel implementations of local sequence alignment: hardware and software / Vipin Chaudhary -- Parallel computing in the analysis of gene expression relationships / Robert Martino -- Parallel algorithms for solving the fragment assembly problem in DNA strands / Enrique Alba -- A cooperative genetic algorithm for knowledge discovery in microarray experiments / Mohammad Khabzaoui -- Parallel and distributed computation of large phylogenetic trees / Alexandros P. Stamatakis -- Phylogenetic parameter estimation on COWs / Ekkehard Petzold -- High-performance phylogeny reconstruction under maximum parsimony / Tiffani Williams -- Protein folding with the parallel replica exchange molecular dynamics method / Ruhong Zhou -- High performance alignment methods for protein threading / R. Andonov -- Parallel evolutionary computations in discerning protein structures / Richard O. Day -- A brief Overview of Grid activities for bioinformatics and health applications / Ali Al Mazari -- Parallel algorithms for bioinformatics / Shahid H. Bokhari -- Cluster and grid infrastructure for computational chemistry and biochemistry / Kim K. Baldridge -- Distributed workflows in bioinformatics / Arun Krishnan -- Molecular structure determination on a computational and data grid / Russ Miller -- GIPSY : a problem solving environment for bioinformatics applications / Rajendra R. Joshi -- TaskSpaces : a software framework for parallel bioinformatics on computational grids / Hans De Sterck -- The organic grid : self-organizing computation on desktop grids / Arjav J. Chakrvarti -- FPGA Computing in modern bioinformatics / H. Simmler -- Virtual microscopy : distributed image storage, retrieval, analysis, and visualization / T. Pan.
Parallel Computing for Bioinformatics is the first book to deal with the topic of parallel computing and bioinformatics. Written by renowned experts and well-reputed researchers in this emerging field, it provides an opportunity for researchers to explore the rich and complex subject of?Bioinformatics?
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